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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924696.1_cds_XP_016472992.1_65168
CDS Infomation

[gene=LOC107794948] [db_xref=GeneID:107794948] [protein=indole-3-glycerol phosphate synthase, chloroplastic-like] [protein_id=XP_016472992.1] [location=complement(join(47892..47975,48224..48292,48383..48465,48936..49014,49423..49587,49678..49722,50393..50467,52685..52861,52966..53214,53571..53771))] [gbkey=CDS]
Sequence

ATGGATTCTGTAATACCATTGAGAACCACCACAGCAACGGCGGCAACTGTAGCGACGACG
GTAAGACCCCGGTTCTCTATTCAACCCCTTTCCAATCCCAGACCCAACAAACCCGCATTC
TCCCTGTCAGTTCCATCATCTATTTTCATGTCCCACCGAGCTCGAAATCTGCCGCAATGT
TCACCCGTTCGAGCTCAACAGGACGGATCAGCGGTGGCTTCAGAATCCACCATTCCCGAA
GGAGATGCTCTCAAAATCAAGGAGTGGGAAGCAGAAAGATTCAAAGACGAAATTGCTACA
AGTGAGGGTATAAGAATCAGAAGGAGGCCGCCATCAGGACCTCCTTTGCACTATGTTGGC
CCTTTTGAATTTCGGCTGCAGAATGAAGGCAATACTCCACGTAACATACTTGAAGAAATT
GTCTGGAACAAGGATAAGGAAGTTGCGCAGATGAAAGAGAAGAGACCTCTTATTGTATTG
AACAAACTGCTTAGCAGTGCTCCACCTACCAGAGATTTTCTAGGAGCTCTGAAAGAATCA
TATTCAAGAACTGAGTTGCCTGCTCTTATTGCTGAAGTGAAGAAGGCTTCTCCAAGTAGA
GGTGTTCTTCGCGAAGATTTTAATCCAGTTGAGATCGCCAAAGCTTATGAAAGAGGTGGA
GCAGCATGCCTTAGTGTTTTGACAGATAAAAAATATTTTCAGGGAAGCTTTGAAAATCTA
GAGGCTATAAGGAATGCTGGAGTAGAGTGCCCTTTGTTGTGTAAAGAATTTGTTATAGAA
GCTTGGCAACTGTACTATGCTCGGGTTAAAGGTGCCGATGCAGTTCTGTTAATTGCTGCT
ATTCTACCAGATCTTGACATCAAATATATGATTAAGATCTGCAAATTACTTGGATTGACA
GCACTAGTTGAGGTGCATGATGAGAGGGAAATGGATCGTGTCCTCGGAATTGACGGGGTT
GAGCTTATTGGCATCAATAATAGAGACCTTGGAACTTTCAAGGTGGACATTAGCAATACC
AAAAAGCTTCTTGAAGGAGAGCGTGGAGAAAGGATCCGTGAGAAGGGCATAATTGTGGTT
GGGGAGTCTGGACTATTTACTCCAGCTGATATTGCTTATGTACAAGAAGCCGGTGTCAAA
GCGGTTCTAGTTGGAGAGTCACTTGTAAAACAGCCAGATCCTACTAAAGGAATAAGTGAA
CTTTTTGGTAAAGACATCTCCTGCTAA

Peptide Sequence

PEP ID

XP_016472992.1
PEP Infomation

PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MDSVIPLRTTTATAATVATTVRPRFSIQPLSNPRPNKPAFSLSVPSSIFMSHRARNLPQC
SPVRAQQDGSAVASESTIPEGDALKIKEWEAERFKDEIATSEGIRIRRRPPSGPPLHYVG
PFEFRLQNEGNTPRNILEEIVWNKDKEVAQMKEKRPLIVLNKLLSSAPPTRDFLGALKES
YSRTELPALIAEVKKASPSRGVLREDFNPVEIAKAYERGGAACLSVLTDKKYFQGSFENL
EAIRNAGVECPLLCKEFVIEAWQLYYARVKGADAVLLIAAILPDLDIKYMIKICKLLGLT
ALVEVHDEREMDRVLGIDGVELIGINNRDLGTFKVDISNTKKLLEGERGERIREKGIIVV
GESGLFTPADIAYVQEAGVKAVLVGESLVKQPDPTKGISELFGKDISC

Transcript Sequence

Gene sequence data has not been registered.